Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Gm5417-201ENSMUST00000079706 384 ntBASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc112A0AUP1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Gm16061-201ENSMUST00000122167 857 ntBASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc112A0AUP1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Gm13474-201ENSMUST00000122466 815 ntBASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Gm36967-201ENSMUST00000193814 266 ntBASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc112A0AUP1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc112A0AUP1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc112A0AUP1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms