Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv1A0A0B4J1G7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv1A0A0B4J1G7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm37292-201ENSMUST00000192062 758 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv1A0A0B4J1G7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm43183-201ENSMUST00000200632 547 ntBASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv1A0A0B4J1G7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms