Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Mir5130-201ENSMUST00000175160 84 ntBASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-7A0A075B6B0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm24841-201ENSMUST00000158676 357 ntBASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6d-7A0A075B6B0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm45058-201ENSMUST00000205810 766 ntBASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6d-7A0A075B6B0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Gm37025-201ENSMUST00000195159 829 ntBASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-7A0A075B6B0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-7A0A075B6B0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms