Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav18A0A075B656 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Gm22240-201ENSMUST00000175225 82 ntBASIC13.36□□□□□ -0.27
Trav18A0A075B656 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav18A0A075B656 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav18A0A075B656 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.36□□□□□ -0.27
Trav18A0A075B656 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Gm27011-201ENSMUST00000182352 972 ntBASIC13.35□□□□□ -0.27
Trav18A0A075B656 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Gm7370-201ENSMUST00000219471 767 ntBASIC13.35□□□□□ -0.27
Trav18A0A075B656 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Gm5417-201ENSMUST00000079706 384 ntBASIC13.35□□□□□ -0.27
Trav18A0A075B656 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav18A0A075B656 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.34□□□□□ -0.27
Trav18A0A075B656 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Gm11539-201ENSMUST00000119837 557 ntBASIC13.34□□□□□ -0.27
Trav18A0A075B656 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.34□□□□□ -0.27
Trav18A0A075B656 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav18A0A075B656 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav18A0A075B656 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav18A0A075B656 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.33□□□□□ -0.28
Trav18A0A075B656 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav18A0A075B656 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms