Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8n-2A0A075B633 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Gm14494-201ENSMUST00000118786 435 ntBASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Gm24513-201ENSMUST00000174964 138 ntBASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav8n-2A0A075B633 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Gm36967-201ENSMUST00000193814 266 ntBASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8n-2A0A075B633 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav8n-2A0A075B633 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Gm27628-201ENSMUST00000184911 107 ntBASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.87□□□□□ -0.03
Trav8n-2A0A075B633 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8n-2A0A075B633 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms