Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trbv4A0A075B5I2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv4A0A075B5I2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv4A0A075B5I2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.33■□□□□ 0.21
Trbv4A0A075B5I2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv4A0A075B5I2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv4A0A075B5I2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv4A0A075B5I2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv4A0A075B5I2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv4A0A075B5I2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms