Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC022616.3-201ENST00000523940 148 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AP001893.2-201ENST00000526949 202 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL133153.1-201ENST00000557756 303 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL845331.3-202ENST00000562856 261 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 KC877982.1-201ENST00000602313 470 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC008536.2-201ENST00000607284 349 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL031666.3-201ENST00000609320 1006 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC084757.4-201ENST00000616350 526 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AC007742.2-201ENST00000618226 398 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL136313.1-201ENST00000624804 202 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A4Q53GD3 AP001486.2-201ENST00000561652 5113 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AL645937.1-201ENST00000641739 1652 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 OR1S2-201ENST00000302592 978 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 RNU6-181P-201ENST00000363225 107 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 Y_RNA.295-201ENST00000364918 102 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 RNA5SP22-201ENST00000365393 109 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 RNU6-516P-201ENST00000411381 104 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 ELOCP4-201ENST00000420090 333 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 MTND1P14-201ENST00000427400 950 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC105914.1-201ENST00000511798 226 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 RNU6-358P-201ENST00000516564 75 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 RNU6-445P-201ENST00000516949 107 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AP000857.1-201ENST00000532151 543 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 GLYCAM1-201ENST00000546596 285 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC244505.7-201ENST00000599675 272 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC006254.3-201ENST00000603353 884 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 SRGNP1-201ENST00000603392 451 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 uc_338.12-201ENST00000616344 181 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC012314.7-201ENST00000619693 93 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC091953.5-201ENST00000622919 233 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 AC009033.1-201ENST00000624279 431 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A4Q53GD3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 Z82217.1-201ENST00000625157 8149 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 SNORA60-201ENST00000362396 134 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 Y_RNA.89-201ENST00000363031 102 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 RNU6-637P-201ENST00000384050 107 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 RPL7P60-201ENST00000397636 735 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MIR1179-201ENST00000408703 91 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 RN7SKP156-201ENST00000410308 342 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 RNA5SP306-201ENST00000411087 107 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AL161631.1-201ENST00000417933 486 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 BEND7P1-201ENST00000422058 457 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MTCO1P20-201ENST00000425366 358 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 NANOGP10-201ENST00000453325 895 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MTND1P12-201ENST00000455231 147 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC135721.1-201ENST00000497954 479 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A4Q53GD3 AC125611.2-201ENST00000551907 647 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms