Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RPS15AP17-201ENST00000470598 390 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC010683.1-201ENST00000473673 378 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 RPL21P99-201ENST00000480369 423 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 MYL12AP1-201ENST00000518490 515 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 COX6CP8-201ENST00000522620 226 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AF279873.1-201ENST00000523393 313 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 OR4T1P-201ENST00000554933 911 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AL160290.3-201ENST00000604869 165 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AL390240.1-201ENST00000612950 384 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC083806.3-201ENST00000614016 455 ntBASIC5.54□□□□□ -1.52
ATG3Q9NT62 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG3Q9NT62 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG3Q9NT62 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG3Q9NT62 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG3Q9NT62 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG3Q9NT62 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 LINC01355-201ENST00000566551 5444 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 KPNA2P2-201ENST00000419546 1489 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 MTND5P19-201ENST00000424872 1794 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 DEFB109C-201ENST00000382575 264 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 DEFB109B-201ENST00000382656 264 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 SNORD37.1-201ENST00000390968 65 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 ENSAP1-201ENST00000392855 326 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RNU6-193P-201ENST00000410977 107 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RPL7P2-201ENST00000427639 268 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RPL7L1P10-201ENST00000427790 463 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RPL37P1-201ENST00000432310 284 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 CEACAMP1-201ENST00000434624 1035 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RPS24P13-201ENST00000442520 397 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 ELOCP24-201ENST00000456370 334 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC083904.1-201ENST00000487828 231 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 FTH1P24-201ENST00000503502 462 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC091885.1-201ENST00000506658 268 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 MTCYBP40-201ENST00000509390 1135 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC098591.2-201ENST00000510152 315 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC023442.1-201ENST00000531247 422 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 MAGOH2P-202ENST00000584384 429 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC121334.2-201ENST00000605387 271 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AL157817.1-201ENST00000614264 790 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC039056.2-201ENST00000622261 511 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 AC008013.2-202ENST00000637965 364 ntBASIC5.53□□□□□ -1.52
ATG3Q9NT62 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.53□□□□□ -1.52
ATG3Q9NT62 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATG3Q9NT62 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 TAB3P1-202ENST00000452645 1634 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 NOL8P1-201ENST00000508336 3529 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATG3Q9NT62 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 SNORA71.3-201ENST00000362582 128 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RNU6-1188P-201ENST00000363795 107 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 Y_RNA.176-201ENST00000363815 109 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RNY4P16-201ENST00000364768 94 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RNU6-1032P-201ENST00000384100 107 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 SNORD3H-201ENST00000384486 214 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RNA5SP44-201ENST00000410446 133 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 MCFD2P1-201ENST00000417812 300 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC006548.1-201ENST00000427470 102 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC119618.1-201ENST00000434191 222 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.52□□□□□ -1.53
ATG3Q9NT62 AL035666.1-201ENST00000446195 348 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RPL21P23-201ENST00000446654 460 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC002381.1-201ENST00000447049 280 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC104058.1-201ENST00000448028 297 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 RPL23AP81-201ENST00000455252 467 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 MIR2053-201ENST00000459295 91 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 UBA52P3-201ENST00000491303 382 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 AC146944.2-203ENST00000502493 354 ntBASIC5.52□□□□□ -1.53
ATG3Q9NT62 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms