Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 Y_RNA.693-201ENST00000516641 110 ntBASIC3.53□□□□□ -1.84
CDH12P55289 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH12P55289 AP003034.1-201ENST00000534621 422 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 TOMM20P2-201ENST00000540082 421 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AL512360.1-201ENST00000555346 234 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AL121576.1-201ENST00000556055 276 ntBASIC3.53□□□□□ -1.84
CDH12P55289 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH12P55289 AC090616.5-202ENST00000582111 297 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MIR4293-201ENST00000584305 78 ntBASIC3.53□□□□□ -1.84
CDH12P55289 GLUD1P4-201ENST00000590914 418 ntBASIC3.53□□□□□ -1.84
CDH12P55289 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH12P55289 AC012507.3-201ENST00000603556 477 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AC008277.2-201ENST00000605196 797 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AC093838.1-201ENST00000613014 469 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MIR6716-201ENST00000613413 80 ntBASIC3.53□□□□□ -1.84
CDH12P55289 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 AC019226.1-201ENST00000625666 515 ntBASIC3.53□□□□□ -1.84
CDH12P55289 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH12P55289 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH12P55289 MIR492-201ENST00000638676 116 ntBASIC3.53□□□□□ -1.84
CDH12P55289 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.84
CDH12P55289 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDH12P55289 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CDH12P55289 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.52□□□□□ -1.85
CDH12P55289 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH12P55289 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CDH12P55289 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH12P55289 HSPA8P1-201ENST00000425843 1833 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC090337.1-201ENST00000579651 2074 ntBASIC3.52□□□□□ -1.85
CDH12P55289 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 RNA5SP443-201ENST00000363083 132 ntBASIC3.52□□□□□ -1.85
CDH12P55289 SNORD56.2-201ENST00000363242 71 ntBASIC3.52□□□□□ -1.85
CDH12P55289 U3.11-201ENST00000364476 212 ntBASIC3.52□□□□□ -1.85
CDH12P55289 RNU6-108P-201ENST00000365558 107 ntBASIC3.52□□□□□ -1.85
CDH12P55289 Y_RNA.381-201ENST00000365666 102 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 Y_RNA.402-201ENST00000383972 102 ntBASIC3.52□□□□□ -1.85
CDH12P55289 RNU6-483P-201ENST00000384088 108 ntBASIC3.52□□□□□ -1.85
CDH12P55289 MIR199A2-201ENST00000385289 110 ntBASIC3.52□□□□□ -1.85
CDH12P55289 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH12P55289 RPL21P65-201ENST00000406094 466 ntBASIC3.52□□□□□ -1.85
CDH12P55289 RNA5SP107-201ENST00000411358 122 ntBASIC3.52□□□□□ -1.85
CDH12P55289 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH12P55289 GPR143P-201ENST00000434155 205 ntBASIC3.52□□□□□ -1.85
CDH12P55289 RPL35AP22-201ENST00000436855 335 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC005094.1-201ENST00000440420 368 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC006480.1-201ENST00000449887 378 ntBASIC3.52□□□□□ -1.85
CDH12P55289 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 RPL7P19-201ENST00000469948 618 ntBASIC3.52□□□□□ -1.85
CDH12P55289 RPS15AP36-201ENST00000492022 382 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC079382.1-201ENST00000493346 557 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC116353.2-201ENST00000505332 712 ntBASIC3.52□□□□□ -1.85
CDH12P55289 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.52□□□□□ -1.85
CDH12P55289 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH12P55289 AC018630.1-201ENST00000541376 925 ntBASIC3.52□□□□□ -1.85
CDH12P55289 ARL2BPP2-201ENST00000550907 489 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC125611.2-201ENST00000551907 647 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
CDH12P55289 AC006504.3-201ENST00000586818 523 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AP000907.4-201ENST00000604143 237 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC007363.1-201ENST00000604736 620 ntBASIC3.52□□□□□ -1.85
CDH12P55289 Z84480.1-201ENST00000605131 311 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AL591034.3-201ENST00000605511 685 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AP001330.5-201ENST00000607176 411 ntBASIC3.52□□□□□ -1.85
CDH12P55289 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH12P55289 AL450472.3-201ENST00000615578 367 ntBASIC3.52□□□□□ -1.85
CDH12P55289 MIR6130-201ENST00000619419 109 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC243312.2-201ENST00000623340 601 ntBASIC3.52□□□□□ -1.85
CDH12P55289 AC112484.5-201ENST00000624189 228 ntBASIC3.52□□□□□ -1.85
CDH12P55289 MIR6830-201ENST00000636015 70 ntBASIC3.52□□□□□ -1.85
CDH12P55289 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH12P55289 AC004520.1-201ENST00000608362 1413 ntBASIC3.52□□□□□ -1.85
CDH12P55289 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH12P55289 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH12P55289 Y_RNA.22-201ENST00000362492 102 ntBASIC3.51□□□□□ -1.85
CDH12P55289 Y_RNA.453-201ENST00000384223 109 ntBASIC3.51□□□□□ -1.85
CDH12P55289 RNU6-74P-201ENST00000384235 107 ntBASIC3.51□□□□□ -1.85
CDH12P55289 MIR1-2-201ENST00000384961 85 ntBASIC3.51□□□□□ -1.85
CDH12P55289 RPS26P8-201ENST00000393490 348 ntBASIC3.51□□□□□ -1.85
CDH12P55289 AL109755.1-201ENST00000401791 649 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms