Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC027309.2-201ENST00000520566 192 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AP001189.2-201ENST00000527320 189 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UPK1AO00322 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC087241.2-201ENST00000535801 324 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AC024224.1-201ENST00000538284 609 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 CR383656.7-201ENST00000548164 174 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPK1AO00322 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC106782.4-201ENST00000568264 210 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 GLUD1P4-201ENST00000590914 418 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 BNIP3P24-201ENST00000593398 557 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AC091946.2-201ENST00000606105 291 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AP003485.2-201ENST00000623636 610 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
UPK1AO00322 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPK1AO00322 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK1AO00322 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK1AO00322 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
UPK1AO00322 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 RNU6-1180P-201ENST00000364935 107 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 SUGT1P1-201ENST00000379514 476 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AL512637.2-201ENST00000431287 1256 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 AL592447.1-201ENST00000447592 540 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 COX6CP18-201ENST00000448769 222 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 AC104164.3-201ENST00000467363 1258 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 RPL23AP45-201ENST00000476406 468 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK1AO00322 COX7A2P2-201ENST00000505291 250 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC010460.2-201ENST00000509054 677 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 RNU4-29P-201ENST00000515943 174 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 RNU5A-7P-201ENST00000515979 116 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UPK1AO00322 UBTFL10-201ENST00000528532 562 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AP000867.2-201ENST00000532468 320 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 SETP7-201ENST00000552169 453 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK1AO00322 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK1AO00322 RPL23AP84-201ENST00000571193 464 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC011260.1-201ENST00000578420 472 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC061975.8-201ENST00000587058 721 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC010620.2-201ENST00000600135 313 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC079089.3-201ENST00000603094 673 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC013444.2-201ENST00000603317 787 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 NUTF2P8-201ENST00000604593 363 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.29□□□□□ -2.04
UPK1AO00322 DUXAP10-204ENST00000612052 616 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 MIR6817-201ENST00000615588 66 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK1AO00322 AC002064.3-201ENST00000623448 346 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 AL356094.1-201ENST00000624663 1212 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 U6.101-201ENST00000637707 76 ntBASIC2.29□□□□□ -2.04
UPK1AO00322 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
UPK1AO00322 Z99496.1-201ENST00000469424 1477 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 SNORA41-201ENST00000384675 132 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
UPK1AO00322 AF274854.1-201ENST00000413236 615 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 DPRXP1-201ENST00000426312 460 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 FCF1P1-201ENST00000432690 571 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 AC024082.2-201ENST00000434771 238 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 NDUFB4P6-201ENST00000436819 366 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK1AO00322 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK1AO00322 SNRPGP6-201ENST00000451124 220 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1AO00322 AL359273.1-201ENST00000510918 627 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 AC112673.1-201ENST00000513168 575 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1AO00322 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1AO00322 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK1AO00322 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.28□□□□□ -2.04
UPK1AO00322 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1AO00322 LARP7P2-201ENST00000575306 125 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 AC015688.2-201ENST00000584523 262 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 VN1R87P-201ENST00000596706 487 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 MTATP6P2-201ENST00000603319 678 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 HSPE1P7-201ENST00000604681 321 ntBASIC2.28□□□□□ -2.04
UPK1AO00322 AP001521.1-201ENST00000609150 300 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms