Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL590099.1-201ENST00000615276 138 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AC116618.1-201ENST00000634617 774 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.23□□□□□ -1.89
ZNF560Q96MR9 MAPK10-322ENST00000641485 4530 ntBASIC3.23□□□□□ -1.89
ZNF560Q96MR9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 Y_RNA.234-201ENST00000364409 97 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 RNU6-343P-201ENST00000364709 104 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 RNU6-359P-201ENST00000365466 108 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 RPS4XP3-201ENST00000398541 413 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 UBA52P6-201ENST00000399822 382 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 OR2B8P-201ENST00000432841 938 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 RPL26P6-201ENST00000440913 438 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 MTND5P14-201ENST00000441481 1267 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC092155.2-201ENST00000454675 477 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 BX322784.1-201ENST00000455793 1077 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 SNORD121B-201ENST00000458838 81 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC011825.1-201ENST00000484967 388 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 RNU6-528P-201ENST00000516926 100 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC034268.2-201ENST00000571784 482 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 MTCO3P24-201ENST00000572729 782 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 AC105224.1-201ENST00000587055 421 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
ZNF560Q96MR9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZNF560Q96MR9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 RPS3AP24-201ENST00000407896 734 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 MIR1290-201ENST00000408735 78 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 MTCYBP38-201ENST00000417160 1123 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 TRIM60P18-201ENST00000441518 828 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC002381.1-201ENST00000447049 280 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL592447.1-201ENST00000447592 540 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 USP9YP10-201ENST00000454868 628 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 RN7SL283P-201ENST00000489055 303 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 POU5F1P7-201ENST00000508759 541 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC109464.2-201ENST00000510242 943 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 RNU6-714P-201ENST00000516963 103 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 OR6C7P-201ENST00000547875 934 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL451007.1-201ENST00000595491 289 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 BBIP1P1-201ENST00000602999 279 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC006270.3-201ENST00000605967 1036 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC245297.2-201ENST00000610119 565 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL450472.3-201ENST00000615578 367 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC006386.1-201ENST00000619436 415 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC090772.4-201ENST00000623599 362 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC090897.3-201ENST00000636973 1157 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.9
ZNF560Q96MR9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.21□□□□□ -1.9
ZNF560Q96MR9 AC011477.1-204ENST00000623416 1325 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 ZNF29P-201ENST00000225587 168 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AL161781.1-201ENST00000354277 403 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 U3.6-201ENST00000363622 211 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 SNORA44-201ENST00000384584 132 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 RNU6-636P-201ENST00000384598 107 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 MRPL50P2-201ENST00000416821 482 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 ZYG11AP1-201ENST00000430329 837 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC084290.1-201ENST00000434995 374 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms