Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 GPM6BP2-201ENST00000432046 144 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 RPL21P89-201ENST00000444021 467 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 GPM6BP1-201ENST00000446387 144 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-333P-201ENST00000459117 107 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC108751.2-201ENST00000469993 231 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC010683.1-201ENST00000473673 378 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC068305.1-201ENST00000497406 726 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 FAM206BP-201ENST00000510179 541 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 SNORA25.17-201ENST00000517184 124 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC103710.2-201ENST00000609912 942 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC084781.2-201ENST00000615568 161 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC040168.1-201ENST00000623594 991 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AP001642.1-201ENST00000624727 2117 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 U6.114-201ENST00000636407 96 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 PCAT14-202ENST00000627127 3935 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AL136164.3-201ENST00000624429 3978 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AL031119.1-201ENST00000404707 1879 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU1-132P-201ENST00000364300 164 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-1029P-201ENST00000384109 107 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-1160P-201ENST00000384546 104 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 Y_RNA.530-201ENST00000384587 101 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-903P-201ENST00000391270 109 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU2-29P-201ENST00000410423 189 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC127537.2-201ENST00000439258 465 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RNU7-59P-201ENST00000459101 61 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 RPL23AP11-201ENST00000475260 469 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC027575.1-201ENST00000481064 460 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC090096.1-201ENST00000489168 390 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC110792.2-201ENST00000510278 224 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 SNORA67.7-201ENST00000516664 135 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC015908.5-201ENST00000623289 343 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 MTND4LP32-201ENST00000636111 270 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 MTND5P42-201ENST00000637720 498 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 AC083843.2-201ENST00000568248 6253 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 SAGE4P-201ENST00000442271 3381 ntBASIC5.63□□□□□ -1.51
PRPF40BQ6NWY9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 OR5P1P-201ENST00000299512 925 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 Y_RNA.445-201ENST00000384168 102 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 PPIAP31-201ENST00000405422 495 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 RNU2-21P-201ENST00000410368 188 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC068533.1-201ENST00000418542 415 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 CYP4F29P-201ENST00000420685 446 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 RPS26P47-201ENST00000427219 348 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 OR2AS1P-201ENST00000427827 319 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 VN1R17P-201ENST00000472048 1090 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AP002812.1-201ENST00000495378 474 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 COX7A2P2-201ENST00000505291 250 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 PARP4P3-201ENST00000510265 317 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-273P-201ENST00000516937 96 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC006270.2-201ENST00000578523 652 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC006272.2-201ENST00000594725 163 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC006133.1-201ENST00000617106 264 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms