Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RNA5SP119-201ENST00000362715 117 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LTBQ06643 SNORA51.6-201ENST00000384151 125 ntBASIC3.68□□□□□ -1.82
LTBQ06643 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LTBQ06643 RPL21P65-201ENST00000406094 466 ntBASIC3.68□□□□□ -1.82
LTBQ06643 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LTBQ06643 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.68□□□□□ -1.82
LTBQ06643 AL139413.1-201ENST00000421309 217 ntBASIC3.68□□□□□ -1.82
LTBQ06643 TIMM9P3-201ENST00000428659 274 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.68□□□□□ -1.82
LTBQ06643 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.68□□□□□ -1.82
LTBQ06643 AP000542.1-201ENST00000448473 371 ntBASIC3.68□□□□□ -1.82
LTBQ06643 MTND3P10-201ENST00000450967 341 ntBASIC3.68□□□□□ -1.82
LTBQ06643 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 AC092001.1-201ENST00000453012 261 ntBASIC3.68□□□□□ -1.82
LTBQ06643 RPL36AP13-201ENST00000457490 317 ntBASIC3.68□□□□□ -1.82
LTBQ06643 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.68□□□□□ -1.82
LTBQ06643 RBM43P1-201ENST00000476891 1081 ntBASIC3.68□□□□□ -1.82
LTBQ06643 RPL31P61-201ENST00000496160 376 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC008628.2-201ENST00000502605 298 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 AC105914.1-201ENST00000511798 226 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC024589.1-201ENST00000512207 263 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC018797.3-201ENST00000513388 1241 ntBASIC3.68□□□□□ -1.82
LTBQ06643 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
LTBQ06643 COX6CP8-201ENST00000522620 226 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 HMGB1P33-201ENST00000563485 527 ntBASIC3.68□□□□□ -1.82
LTBQ06643 MIR5186-201ENST00000577504 120 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.68□□□□□ -1.82
LTBQ06643 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.68□□□□□ -1.82
LTBQ06643 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.68□□□□□ -1.82
LTBQ06643 CKS1BP3-201ENST00000600888 237 ntBASIC3.68□□□□□ -1.82
LTBQ06643 AC007390.2-201ENST00000606229 3803 ntBASIC3.68□□□□□ -1.82
LTBQ06643 LINC00901.1-201ENST00000617252 152 ntBASIC3.68□□□□□ -1.82
LTBQ06643 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.68□□□□□ -1.82
LTBQ06643 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LTBQ06643 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.67□□□□□ -1.82
LTBQ06643 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LTBQ06643 CASC19-280ENST00000642102 1351 ntBASIC3.67□□□□□ -1.82
LTBQ06643 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 GNG5P1-201ENST00000255500 204 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RPL23AP57-201ENST00000332361 466 ntBASIC3.67□□□□□ -1.82
LTBQ06643 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LTBQ06643 RNU6-1103P-201ENST00000384150 107 ntBASIC3.67□□□□□ -1.82
LTBQ06643 MT-TL1-201ENST00000386347 75 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.67□□□□□ -1.82
LTBQ06643 NDUFB4P4-201ENST00000404822 243 ntBASIC3.67□□□□□ -1.82
LTBQ06643 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 PIGFP2-201ENST00000421400 651 ntBASIC3.67□□□□□ -1.82
LTBQ06643 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LTBQ06643 MTCO1P20-201ENST00000425366 358 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RPL31P35-201ENST00000431058 377 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RPL22P17-201ENST00000438729 315 ntBASIC3.67□□□□□ -1.82
LTBQ06643 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.67□□□□□ -1.82
LTBQ06643 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.67□□□□□ -1.82
LTBQ06643 AC002381.1-201ENST00000447049 280 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AL500522.2-201ENST00000448562 343 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AL162388.1-201ENST00000450912 352 ntBASIC3.67□□□□□ -1.82
LTBQ06643 C1DP4-201ENST00000455429 424 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC087312.1-201ENST00000471411 480 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC090453.1-201ENST00000495560 436 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RPS27AP13-201ENST00000498403 237 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.67□□□□□ -1.82
LTBQ06643 RNU6-358P-201ENST00000516564 75 ntBASIC3.67□□□□□ -1.82
LTBQ06643 RN7SKP82-201ENST00000516786 223 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.67□□□□□ -1.82
LTBQ06643 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.67□□□□□ -1.82
LTBQ06643 AC008127.2-201ENST00000549925 1075 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.67□□□□□ -1.82
LTBQ06643 MIR3682-201ENST00000581338 84 ntBASIC3.67□□□□□ -1.82
LTBQ06643 MIR5684-201ENST00000585074 65 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC104662.1-201ENST00000604448 511 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC008277.2-201ENST00000605196 797 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC008536.2-201ENST00000607284 349 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC063943.3-201ENST00000615562 356 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC104260.1-201ENST00000616660 539 ntBASIC3.67□□□□□ -1.82
LTBQ06643 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LTBQ06643 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.67□□□□□ -1.82
LTBQ06643 AL357559.1-201ENST00000622228 274 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC000123.2-201ENST00000623124 461 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AL732618.1-201ENST00000623251 301 ntBASIC3.67□□□□□ -1.82
LTBQ06643 AC091905.1-201ENST00000624400 311 ntBASIC3.67□□□□□ -1.82
LTBQ06643 LRRC77P-213ENST00000637727 880 ntBASIC3.67□□□□□ -1.82
LTBQ06643 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.67□□□□□ -1.82
LTBQ06643 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LTBQ06643 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
LTBQ06643 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.67□□□□□ -1.82
LTBQ06643 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.67□□□□□ -1.82
LTBQ06643 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LTBQ06643 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms