Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
RIF1Q5UIP0 AGGF1P8-201ENST00000562979 1000 ntBASIC1.65□□□□□ -2.14
RIF1Q5UIP0 MTCO3P13-201ENST00000577757 781 ntBASIC1.65□□□□□ -2.14
RIF1Q5UIP0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.65□□□□□ -2.14
RIF1Q5UIP0 OR4G1P-203ENST00000641984 1631 ntBASIC1.65□□□□□ -2.14
RIF1Q5UIP0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 ZNF542P-204ENST00000482727 1305 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 RNU6-53P-201ENST00000365367 106 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AC002524.1-201ENST00000411687 547 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 NDUFB4P5-201ENST00000415445 361 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AC244505.4-201ENST00000434905 287 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 SSXP5-201ENST00000443473 287 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.65□□□□□ -2.15
RIF1Q5UIP0 AC011712.1-201ENST00000588959 234 ntBASIC1.65□□□□□ -2.15
RIF1Q5UIP0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 RPS15AP36-201ENST00000492022 382 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 AL356575.1-201ENST00000603008 283 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 MIR625-201ENST00000385047 85 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 MTND1P18-201ENST00000448191 573 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 AC021146.7-201ENST00000509604 775 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.64□□□□□ -2.15
RIF1Q5UIP0 MTND5P27-201ENST00000428871 1720 ntBASIC1.64□□□□□ -2.15
RIF1Q5UIP0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 RPL36AP6-201ENST00000435770 321 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 USP9YP15-201ENST00000442391 422 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC090751.1-201ENST00000566966 267 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC096720.1-201ENST00000604441 183 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 CKAP2P1-201ENST00000555477 2049 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 ZNF355P-201ENST00000427301 3216 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 POLHP1-201ENST00000411806 470 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 USP9YP27-201ENST00000418455 438 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AL645568.3-201ENST00000433683 316 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 XKRY2-201ENST00000442362 1093 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 Y_RNA.681-201ENST00000516445 113 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AP000787.2-201ENST00000604432 568 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 AC013562.2-201ENST00000611632 603 ntBASIC1.63□□□□□ -2.15
RIF1Q5UIP0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 MTCYBP7-201ENST00000419540 1134 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 PAICSP7-201ENST00000419829 962 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AL138785.1-201ENST00000425821 331 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AC109446.2-201ENST00000567872 497 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 RPS3AP23-202ENST00000574601 686 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 STMN1P1-201ENST00000617809 440 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 LRRC77P-213ENST00000637727 880 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 MTND5P12-201ENST00000502851 1449 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 HSPD1P16-201ENST00000402302 394 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 UBE2V1P6-201ENST00000430840 422 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 SEPT7P3-201ENST00000455017 621 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AC109464.2-201ENST00000510242 943 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RIF1Q5UIP0 AP001148.1-201ENST00000624124 2359 ntBASIC1.62□□□□□ -2.15
RIF1Q5UIP0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 RNU6-249P-201ENST00000363016 102 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AP002345.1-201ENST00000456493 928 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 snoU109.4-201ENST00000458953 143 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 RPL23AP44-201ENST00000482216 473 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC114801.2-201ENST00000503825 781 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC087241.2-201ENST00000535801 324 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 AC080078.3-201ENST00000605407 463 ntBASIC1.61□□□□□ -2.15
RIF1Q5UIP0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.61□□□□□ -2.15
RIF1Q5UIP0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms