Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Htra1Q9R118 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.16■□□□□ 0.02
Htra1Q9R118 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.16■□□□□ 0.02
Htra1Q9R118 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Htra1Q9R118 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.16■□□□□ 0.02
Htra1Q9R118 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Htra1Q9R118 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.15■□□□□ 0.02
Htra1Q9R118 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Htra1Q9R118 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Htra1Q9R118 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Htra1Q9R118 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.15■□□□□ 0.02
Htra1Q9R118 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Gm10517-202ENSMUST00000192970 758 ntBASIC15.14■□□□□ 0.01
Htra1Q9R118 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.14■□□□□ 0.01
Htra1Q9R118 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.14■□□□□ 0.01
Htra1Q9R118 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Htra1Q9R118 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
Htra1Q9R118 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Htra1Q9R118 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Htra1Q9R118 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.13■□□□□ 0.01
Htra1Q9R118 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Htra1Q9R118 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Htra1Q9R118 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.13■□□□□ 0.01
Htra1Q9R118 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Htra1Q9R118 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms