Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Gm24513-201ENSMUST00000174964 138 ntBASIC14.28□□□□□ -0.12
Nubp1Q9R060 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.28□□□□□ -0.12
Nubp1Q9R060 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.28□□□□□ -0.12
Nubp1Q9R060 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.28□□□□□ -0.12
Nubp1Q9R060 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.28□□□□□ -0.12
Nubp1Q9R060 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.28□□□□□ -0.12
Nubp1Q9R060 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nubp1Q9R060 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nubp1Q9R060 AC107452.3-201ENSMUST00000228807 1308 ntBASIC14.27□□□□□ -0.12
Nubp1Q9R060 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Gm27397-201ENSMUST00000184997 107 ntBASIC14.27□□□□□ -0.13
Nubp1Q9R060 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.27□□□□□ -0.13
Nubp1Q9R060 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.27□□□□□ -0.13
Nubp1Q9R060 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.27□□□□□ -0.13
Nubp1Q9R060 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.26□□□□□ -0.13
Nubp1Q9R060 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nubp1Q9R060 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.25□□□□□ -0.13
Nubp1Q9R060 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms