Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rbfox1Q9JJ43 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rbfox1Q9JJ43 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Gm13474-201ENSMUST00000122466 815 ntBASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rbfox1Q9JJ43 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Rbfox1Q9JJ43 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rbfox1Q9JJ43 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms