Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Copb1Q9JIF7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Copb1Q9JIF7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Copb1Q9JIF7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Copb1Q9JIF7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.85■□□□□ 0.45
Copb1Q9JIF7 Gm10566-201ENSMUST00000086739 996 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms