Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube3bQ9ES34 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ube3bQ9ES34 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ube3bQ9ES34 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube3bQ9ES34 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.33■□□□□ 0.69
Ube3bQ9ES34 Gm25406-201ENSMUST00000157599 105 ntBASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube3bQ9ES34 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube3bQ9ES34 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3bQ9ES34 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube3bQ9ES34 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms