Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tlr9Q9EQU3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tlr9Q9EQU3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tlr9Q9EQU3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tlr9Q9EQU3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tlr9Q9EQU3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tlr9Q9EQU3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Gm18958-201ENSMUST00000174258 762 ntBASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tlr9Q9EQU3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Gm27000-201ENSMUST00000182943 842 ntBASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Tlr9Q9EQU3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms