Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm4518-201ENSMUST00000182638 718 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.51■□□□□ 0.55
Upf1Q9EPU0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Gm16215-201ENSMUST00000161990 637 ntBASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Gm44855-201ENSMUST00000205725 362 ntBASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upf1Q9EPU0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Gm13453-201ENSMUST00000118708 357 ntBASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upf1Q9EPU0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upf1Q9EPU0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Gm38294-201ENSMUST00000192831 381 ntBASIC18.47■□□□□ 0.55
Upf1Q9EPU0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upf1Q9EPU0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Upf1Q9EPU0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms