Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp4bQ9D8B3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp4bQ9D8B3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Gm9013-201ENSMUST00000132939 882 ntBASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.53■□□□□ 0.88
Chmp4bQ9D8B3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chmp4bQ9D8B3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp4bQ9D8B3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Chmp4bQ9D8B3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Chmp4bQ9D8B3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp4bQ9D8B3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
Chmp4bQ9D8B3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Gm10231-201ENSMUST00000181584 441 ntBASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Gm10175-202ENSMUST00000208752 441 ntBASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp4bQ9D8B3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms