Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Mir1199-201ENSMUST00000117015 119 ntBASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Chmp5Q9D7S9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Chmp5Q9D7S9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Timm23-208ENSMUST00000226683 750 ntBASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chmp5Q9D7S9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Chmp5Q9D7S9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Gm13186-201ENSMUST00000118031 316 ntBASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.4■□□□□ 0.86
Chmp5Q9D7S9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.39■□□□□ 0.86
Chmp5Q9D7S9 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.39■□□□□ 0.86
Chmp5Q9D7S9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Chmp5Q9D7S9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp5Q9D7S9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chmp5Q9D7S9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms