Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Stag1Q9D3E6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Gm27525-201ENSMUST00000184465 107 ntBASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Stag1Q9D3E6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Stag1Q9D3E6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Gm13216-201ENSMUST00000117145 591 ntBASIC19.39■□□□□ 0.69
Stag1Q9D3E6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Stag1Q9D3E6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.38■□□□□ 0.69
Stag1Q9D3E6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Stag1Q9D3E6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Gm12350-201ENSMUST00000121208 462 ntBASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Gm1401-201ENSMUST00000122048 772 ntBASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Stag1Q9D3E6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Gm4535-201ENSMUST00000182274 558 ntBASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Gm10355-201ENSMUST00000097146 517 ntBASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms