Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Gm9727-201ENSMUST00000161387 555 ntBASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Gm6736-201ENSMUST00000166583 948 ntBASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nip7Q9CXK8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Gm4995-201ENSMUST00000117247 432 ntBASIC20.27■□□□□ 0.84
Nip7Q9CXK8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nip7Q9CXK8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Nip7Q9CXK8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nip7Q9CXK8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nip7Q9CXK8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Nip7Q9CXK8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nip7Q9CXK8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.26■□□□□ 0.83
Nip7Q9CXK8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nip7Q9CXK8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nip7Q9CXK8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms