Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc3Q9CW03 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.21■□□□□ 0.67
Smc3Q9CW03 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Gm18115-201ENSMUST00000221209 621 ntBASIC19.21■□□□□ 0.67
Smc3Q9CW03 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smc3Q9CW03 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Smc3Q9CW03 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Smc3Q9CW03 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Gm7370-201ENSMUST00000219471 767 ntBASIC19.2■□□□□ 0.66
Smc3Q9CW03 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smc3Q9CW03 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.19■□□□□ 0.66
Smc3Q9CW03 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc3Q9CW03 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
Smc3Q9CW03 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc3Q9CW03 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms