Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc1aQ9CU62 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc1aQ9CU62 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Gm11355-201ENSMUST00000121120 306 ntBASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Gm17807-201ENSMUST00000186869 298 ntBASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Gm17808-201ENSMUST00000200859 894 ntBASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.24■□□□□ 0.51
Smc1aQ9CU62 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smc1aQ9CU62 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc1aQ9CU62 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.21■□□□□ 0.51
Smc1aQ9CU62 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms