Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim33Q99PP7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.21■□□□□ 0.18
Trim33Q99PP7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Trim33Q99PP7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim33Q99PP7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Gm11336-201ENSMUST00000118168 334 ntBASIC16.2■□□□□ 0.18
Trim33Q99PP7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.2■□□□□ 0.18
Trim33Q99PP7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.2■□□□□ 0.18
Trim33Q99PP7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.2■□□□□ 0.18
Trim33Q99PP7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim33Q99PP7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Gm11355-201ENSMUST00000121120 306 ntBASIC16.19■□□□□ 0.18
Trim33Q99PP7 Gm37722-201ENSMUST00000193757 208 ntBASIC16.19■□□□□ 0.18
Trim33Q99PP7 Gm44450-201ENSMUST00000199528 114 ntBASIC16.19■□□□□ 0.18
Trim33Q99PP7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim33Q99PP7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim33Q99PP7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.18■□□□□ 0.18
Trim33Q99PP7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim33Q99PP7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.17■□□□□ 0.18
Trim33Q99PP7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Gm23634-201ENSMUST00000175071 91 ntBASIC16.17■□□□□ 0.18
Trim33Q99PP7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim33Q99PP7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim33Q99PP7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms