Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Gm20553-201ENSMUST00000204205 844 ntBASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Gm5745-201ENSMUST00000183748 313 ntBASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Gm27301-201ENSMUST00000184012 127 ntBASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh15Q99PJ1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh15Q99PJ1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh15Q99PJ1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh15Q99PJ1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Mir449b-201ENSMUST00000104833 80 ntBASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Rprl2-201ENSMUST00000157150 290 ntBASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh15Q99PJ1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh15Q99PJ1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms