Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Gm9013-201ENSMUST00000132939 882 ntBASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tlr3Q99MB1 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tlr3Q99MB1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr3Q99MB1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.52■□□□□ 0.39
Tlr3Q99MB1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr3Q99MB1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tlr3Q99MB1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Gm36967-201ENSMUST00000193814 266 ntBASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tlr3Q99MB1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tlr3Q99MB1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Mir770-201ENSMUST00000103252 94 ntBASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tlr3Q99MB1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms