Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha2Q91Y17 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Gm9103-201ENSMUST00000119371 405 ntBASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha2Q91Y17 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha2Q91Y17 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Rprl3-201ENSMUST00000157400 290 ntBASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha2Q91Y17 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha2Q91Y17 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms