Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb1Q91Y08 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb1Q91Y08 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb1Q91Y08 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb1Q91Y08 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Gm9013-201ENSMUST00000132939 882 ntBASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdhb1Q91Y08 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb1Q91Y08 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb1Q91Y08 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb1Q91Y08 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdhb1Q91Y08 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb1Q91Y08 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms