Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Gm37856-201ENSMUST00000191634 999 ntBASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhgb2Q91XX7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Gm5643-201ENSMUST00000117081 966 ntBASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhgb2Q91XX7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhgb2Q91XX7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhgb2Q91XX7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhgb2Q91XX7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms