Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trex1Q91XB0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.67■□□□□ 0.58
Trex1Q91XB0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Gm6089-201ENSMUST00000197666 938 ntBASIC18.67■□□□□ 0.58
Trex1Q91XB0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.67■□□□□ 0.58
Trex1Q91XB0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.67■□□□□ 0.58
Trex1Q91XB0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm8655-201ENSMUST00000221159 852 ntBASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trex1Q91XB0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trex1Q91XB0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.65■□□□□ 0.58
Trex1Q91XB0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.65■□□□□ 0.58
Trex1Q91XB0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Gm15590-201ENSMUST00000078419 552 ntBASIC18.65■□□□□ 0.58
Trex1Q91XB0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trex1Q91XB0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trex1Q91XB0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Trex1Q91XB0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trex1Q91XB0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.64■□□□□ 0.57
Trex1Q91XB0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.64■□□□□ 0.57
Trex1Q91XB0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.64■□□□□ 0.57
Trex1Q91XB0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trex1Q91XB0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gm6550-201ENSMUST00000187574 993 ntBASIC18.63■□□□□ 0.57
Trex1Q91XB0 Gm37935-201ENSMUST00000192012 982 ntBASIC18.63■□□□□ 0.57
Trex1Q91XB0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trex1Q91XB0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.63■□□□□ 0.57
Trex1Q91XB0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms