Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Gm18115-201ENSMUST00000221209 621 ntBASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx41Q91VN6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx41Q91VN6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ddx41Q91VN6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ddx41Q91VN6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx41Q91VN6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gm7153-201ENSMUST00000117092 455 ntBASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx41Q91VN6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Gm44450-201ENSMUST00000199528 114 ntBASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx41Q91VN6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms