Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Gm17661-201ENSMUST00000170317 270 ntBASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.5■□□□□ 0.23
Rpa1Q8VEE4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Gm11249-201ENSMUST00000117071 859 ntBASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rpa1Q8VEE4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rpa1Q8VEE4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rpa1Q8VEE4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rpa1Q8VEE4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms