Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sgms1Q8VCQ6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.66■□□□□ 0.42
Sgms1Q8VCQ6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Gm21362-201ENSMUST00000194272 928 ntBASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sgms1Q8VCQ6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sgms1Q8VCQ6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sgms1Q8VCQ6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sgms1Q8VCQ6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.64■□□□□ 0.41
Sgms1Q8VCQ6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sgms1Q8VCQ6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.62■□□□□ 0.41
Sgms1Q8VCQ6 AA414768-201ENSMUST00000121924 1257 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms