Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atp2a1Q8R429 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atp2a1Q8R429 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.21■□□□□ 0.5
Atp2a1Q8R429 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Rps4l-201ENSMUST00000071745 943 ntBASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atp2a1Q8R429 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Gm27867-201ENSMUST00000184778 125 ntBASIC18.19■□□□□ 0.5
Atp2a1Q8R429 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atp2a1Q8R429 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Gm11452-201ENSMUST00000122376 690 ntBASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atp2a1Q8R429 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atp2a1Q8R429 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.17■□□□□ 0.5
Atp2a1Q8R429 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.17■□□□□ 0.5
Atp2a1Q8R429 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms