Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Gm10013-201ENSMUST00000106074 672 ntBASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Gm11355-201ENSMUST00000121120 306 ntBASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Gm18032-201ENSMUST00000222541 538 ntBASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim29Q8R2Q0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim29Q8R2Q0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim29Q8R2Q0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim29Q8R2Q0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim29Q8R2Q0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms