Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp7Q8R1T1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Gm25406-201ENSMUST00000157599 105 ntBASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp7Q8R1T1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Gm6089-201ENSMUST00000197666 938 ntBASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp7Q8R1T1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Gm11594-201ENSMUST00000122313 162 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Gm6550-201ENSMUST00000187574 993 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Psmb5-202ENSMUST00000227257 622 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Gm15590-201ENSMUST00000078419 552 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp7Q8R1T1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Gm11780-201ENSMUST00000136880 516 ntBASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 AV026068-213ENSMUST00000223675 1171 ntBASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Chmp7Q8R1T1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Chmp7Q8R1T1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp7Q8R1T1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm11779-201ENSMUST00000118541 368 ntBASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp7Q8R1T1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms