Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zcchc9Q8R1J3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.27■□□□□ 0.19
Zcchc9Q8R1J3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zcchc9Q8R1J3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Zcchc9Q8R1J3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zcchc9Q8R1J3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Gm15372-201ENSMUST00000120729 834 ntBASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Gm18195-201ENSMUST00000207604 706 ntBASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zcchc9Q8R1J3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Gm29707-201ENSMUST00000196325 491 ntBASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zcchc9Q8R1J3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zcchc9Q8R1J3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.23■□□□□ 0.19
Zcchc9Q8R1J3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms