Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc5Q8CG46 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Gm8520-201ENSMUST00000186517 868 ntBASIC20.22■□□□□ 0.83
Smc5Q8CG46 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.22■□□□□ 0.83
Smc5Q8CG46 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc5Q8CG46 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Smc5Q8CG46 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Asic1-205ENSMUST00000228185 1818 ntBASIC20.21■□□□□ 0.83
Smc5Q8CG46 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.21■□□□□ 0.83
Smc5Q8CG46 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc5Q8CG46 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc5Q8CG46 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gm29707-201ENSMUST00000196325 491 ntBASIC20.19■□□□□ 0.82
Smc5Q8CG46 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc5Q8CG46 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc5Q8CG46 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc5Q8CG46 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms