Protein–RNA interactions for Protein: Q8CDE2

Ccin, Calicin, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcinQ8CDE2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.21■□□□□ 0.19
CcinQ8CDE2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.21■□□□□ 0.19
CcinQ8CDE2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.21■□□□□ 0.19
CcinQ8CDE2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.21■□□□□ 0.19
CcinQ8CDE2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.21■□□□□ 0.19
CcinQ8CDE2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CcinQ8CDE2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CcinQ8CDE2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.2■□□□□ 0.18
CcinQ8CDE2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CcinQ8CDE2 Rarb-207ENSMUST00000225921 2756 ntBASIC16.2■□□□□ 0.18
CcinQ8CDE2 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.19■□□□□ 0.18
CcinQ8CDE2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.19■□□□□ 0.18
CcinQ8CDE2 Gm25406-201ENSMUST00000157599 105 ntBASIC16.19■□□□□ 0.18
CcinQ8CDE2 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.19■□□□□ 0.18
CcinQ8CDE2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.19■□□□□ 0.18
CcinQ8CDE2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CcinQ8CDE2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.18■□□□□ 0.18
CcinQ8CDE2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm24513-201ENSMUST00000174964 138 ntBASIC16.18■□□□□ 0.18
CcinQ8CDE2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm27397-201ENSMUST00000184997 107 ntBASIC16.18■□□□□ 0.18
CcinQ8CDE2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.18■□□□□ 0.18
CcinQ8CDE2 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CcinQ8CDE2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.17■□□□□ 0.18
CcinQ8CDE2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CcinQ8CDE2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms