Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Usp44Q8C2S0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp44Q8C2S0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp44Q8C2S0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp44Q8C2S0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp44Q8C2S0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp44Q8C2S0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp44Q8C2S0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms