Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trerf1Q8BXJ2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trerf1Q8BXJ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trerf1Q8BXJ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trerf1Q8BXJ2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trerf1Q8BXJ2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Trerf1Q8BXJ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.21■□□□□ 0.34
Trerf1Q8BXJ2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Trerf1Q8BXJ2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trerf1Q8BXJ2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trerf1Q8BXJ2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trerf1Q8BXJ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trerf1Q8BXJ2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms