Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Cpsf4Q8BQZ5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Gm18101-201ENSMUST00000215769 548 ntBASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf4Q8BQZ5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Gm23634-201ENSMUST00000175071 91 ntBASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf4Q8BQZ5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Gm18958-201ENSMUST00000174258 762 ntBASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Mir1668-201ENSMUST00000184114 107 ntBASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf4Q8BQZ5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4Q8BQZ5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4Q8BQZ5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.83■□□□□ 0.13
Cpsf4Q8BQZ5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf4Q8BQZ5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms