Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smg1Q8BKX6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smg1Q8BKX6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm17968-201ENSMUST00000194902 784 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm44335-201ENSMUST00000196879 141 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm44297-201ENSMUST00000198304 141 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm44346-201ENSMUST00000198851 141 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smg1Q8BKX6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gm27622-201ENSMUST00000183779 60 ntBASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gm27300-201ENSMUST00000184085 97 ntBASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gm27335-201ENSMUST00000184758 97 ntBASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms