Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim50Q810I2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trim50Q810I2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trim50Q810I2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim50Q810I2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.92■□□□□ 0.14
Trim50Q810I2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim50Q810I2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim50Q810I2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim50Q810I2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.91■□□□□ 0.14
Trim50Q810I2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim50Q810I2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim50Q810I2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.91■□□□□ 0.14
Trim50Q810I2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trim50Q810I2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Trim50Q810I2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.91■□□□□ 0.14
Trim50Q810I2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim50Q810I2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim50Q810I2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim50Q810I2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim50Q810I2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Gm9013-201ENSMUST00000132939 882 ntBASIC15.89■□□□□ 0.13
Trim50Q810I2 Gm6659-201ENSMUST00000174752 547 ntBASIC15.89■□□□□ 0.13
Trim50Q810I2 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.89■□□□□ 0.13
Trim50Q810I2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim50Q810I2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim50Q810I2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms