Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vrk1Q80X41 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44357-201ENSMUST00000195897 142 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm19658-201ENSMUST00000196231 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44367-201ENSMUST00000196836 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44350-201ENSMUST00000197197 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44390-201ENSMUST00000197533 144 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44313-201ENSMUST00000198018 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44486-201ENSMUST00000198508 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44314-201ENSMUST00000199263 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44394-201ENSMUST00000199558 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44484-201ENSMUST00000199873 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44466-201ENSMUST00000200264 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44359-201ENSMUST00000200671 138 ntBASIC15.55■□□□□ 0.08
Vrk1Q80X41 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vrk1Q80X41 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.54■□□□□ 0.08
Vrk1Q80X41 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vrk1Q80X41 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.53■□□□□ 0.08
Vrk1Q80X41 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.53■□□□□ 0.08
Vrk1Q80X41 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vrk1Q80X41 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.52■□□□□ 0.08
Vrk1Q80X41 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Vrk1Q80X41 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms