Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim36Q80WG7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.77■□□□□ 0.12
Trim36Q80WG7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim36Q80WG7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim36Q80WG7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Gm18959-201ENSMUST00000208954 655 ntBASIC15.76■□□□□ 0.11
Trim36Q80WG7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.76■□□□□ 0.11
Trim36Q80WG7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim36Q80WG7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
Trim36Q80WG7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Gm6659-201ENSMUST00000174752 547 ntBASIC15.75■□□□□ 0.11
Trim36Q80WG7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms